Table of Contents

• Preface

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• 1. Introduction
  • 1.1 The mar345 Image Plate Detector
  • 1.2 The Standard mar Goniostat
  • 1.3 General Remarks About Program mar345
  • 1.4 Computer Requirements

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• 2. Program mar345
  • 2.1 Basic Concepts
  • 2.2 Environment
  • 2.3 Command Line Options
  • 2.4 User Interface
    • 2.4.1 "Main" Window
      • 2.4.1.1 Menu Bar
        • 2.4.1.1.1 File Menu
        • 2.4.1.1.2 Help Menu
      • 2.4.1.2 Status
    • 2.4.2 Image
    • 2.4.3 Progress
    • 2.4.4 X-ray Setup
    • 2.4.5 Shutter Timer
    • 2.4.6 Log-file
    • 2.4.7 Hardware Status
    • 2.4.8 Error Window
    • 2.4.9 Move Distance
    • 2.4.10 Move Phi
    • 2.4.11 Initialize
    • 2.4.12 Scan
    • 2.4.13 MetalJet
    • 2.4.14 IuS

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• 3. Image Display
  • 3.1 Introduction
  • 3.2 Menu Bar
    • 3.2.1 Windows Menu
    • 3.2.2 Options Menu
  • 3.3 Toolbox
    • 3.4.1 Mouse Button Functions
    • 3.4.2 Information Areas
  • 3.5 "File" Window
  • 3.6 "Colors" Window
  • 3.7 3-D Plot
  • 3.8 "Cross-section" Window

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• 4. Collect
  • 4.2 Single Set
    • 4.2.1 Directory, Image Root and Reference Image
    • 4.2.2 Scan Mode, Output Format and Collect Mode
    • 4.2.3 Exposure Settings
  • 4.3 Multiple Sets
  • 4.4 Index Crystal
  • 4.5 MAD Data
  • 4.6 Load, Save & Copy Parameters
    • 4.6.1 Load Parameters
    • 4.6.2 Save Parameters
    • 4.6.3 Copy Parameters
  • 4.7 IuS Options

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• 5. Input
  • 5.1 Overview
  • 5.2 Configuration File
    • 5.2.1 Keywords
    • 5.2.2 Example
  • 5.3 Calibration Files
  • 5.4 Parameter File
    • 5.4.1 Keywords
    • 5.4.2 Example
  • 5.5 Command File
    • 5.5.1 Examples
  • 5.6 Shell Script
  • 5.7 Images
  • 5.8 Scale File

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• 6. Output
  • 6.1 Overview
  • 6.2 Lock File
  • 6.3 Message File
  • 6.4 Log File
  • 6.5 Spy Files
  • 6.6 Statistics File
  • 6.7 Parameter File
  • 6.8 Status File
  • 6.9 Data Images
  • 6.10 ASCII Summary File
  • 6.11 HTML Summary File
  • 6.12 Errors File

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• 7. REST API
  • 7.1. Overview
  • 7.2. Database
  • 7.3. API
    • 7.3.1 Introduction
    • 7.3.2 HTTP requests
    • 7.3.3 Commands
      • 7.3.3.1 ping
      • 7.3.3.2 auth
      • 7.3.3.3 show
      • 7.3.3.4 cmd
      • 7.3.3.5 img
      • 7.3.3.6 json